Principles of Medical Biochemistry

Höfundur Gerhard Meisenberg

Útgefandi Elsevier Limited (UK)

Snið ePub

Print ISBN 9780323296168

Útgáfa 4

Útgáfuár 2017

7.890 kr.

Description

Efnisyfirlit

  • Cover image
  • Title page
  • Table of Contents
  • Copyright
  • Preface
  • Faculty resources
  • Part One: Principles of Molecular Structure and Function
  • Chapter 1: Introduction to Biomolecules
  • Water is the solvent of life
  • Water contains hydronium ions and hydroxyl ions
  • Ionizable groups are characterized by their pk values
  • The blood pH is tightly regulated
  • Acidosis and alkalosis are common in clinical practice
  • Bonds are formed by reactions between functional groups
  • Isomeric forms are common in biomolecules
  • Properties of biomolecules are determined by their noncovalent interactions
  • Triglycerides consist of fatty acids and glycerol
  • Monosaccharides are polyalcohols with a keto group or an aldehyde group
  • Monosaccharides form ring structures
  • Complex carbohydrates are formed by glycosidic bonds
  • Polypeptides are formed from amino acids
  • Nucleic acids are formed from nucleotides
  • Most biomolecules are polymers
  • Summary
  • Questions
  • Chapter 2: Introduction to Protein Structure
  • Amino acids are zwitterions
  • Amino acid side chains form many noncovalent interactions
  • Peptide bonds and disulfide bonds form the primary structure of proteins
  • Proteins can fold themselves into many shapes
  • α-helix and β-pleated sheet are the most common secondary structures in proteins
  • Globular proteins have a hydrophobic core
  • Proteins lose their biological activities when their higher-order structure is destroyed
  • The solubility of proteins depends on pH and salt concentration
  • Proteins absorb ultraviolet radiation
  • Proteins can be separated by their charge or their molecular weight
  • Abnormal protein aggregates can cause disease
  • Neurodegenerative diseases are caused by protein aggregates
  • Protein misfolding can be contagious
  • Summary
  • Questions
  • Chapter 3: Oxygen-Binding Proteins: Hemoglobin and Myoglobin
  • The heme group is the oxygen-binding site of hemoglobin and myoglobin
  • Myoglobin is a tightly packed globular protein
  • Red blood cells are specialized for oxygen transport
  • The hemoglobins are tetrameric proteins
  • Oxygenated and deoxygenated hemoglobin have different quaternary structures
  • Oxygen binding to hemoglobin is cooperative
  • 2,3-Bisphosphoglycerate is a negative allosteric effector of oxygen binding to hemoglobin
  • Fetal hemoglobin has a higher oxygen-binding affinity than does adult hemoglobin
  • The Bohr effect facilitates oxygen delivery
  • Most carbon dioxide is transported as bicarbonate
  • Summary
  • Questions
  • Chapter 4: Enzymatic Reactions
  • The equilibrium constant describes the equilibrium of the reaction
  • The free energy change is the driving force for chemical reactions
  • The standard free energy change determines the equilibrium
  • Enzymes are both powerful and selective
  • The substrate must bind to its enzyme before the reaction can proceed
  • Rate constants are useful for describing reaction rates
  • Enzymes decrease the free energy of activation
  • Many enzymatic reactions can be described by michaelis-menten kinetics
  • Km and vmax can be determined graphically
  • Substrate half-life can be determined for first-order but not zero-order reactions
  • Kcat/km predicts the enzyme activity at low substrate concentration
  • Allosteric enzymes do not conform to michaelis-menten kinetics
  • Enzyme activity depends on temperature and pH
  • Different types of reversible enzyme inhibition can be distinguished kinetically
  • Covalent modification can inhibit enzymes irreversibly
  • Enzymes stabilize the transition state
  • Chymotrypsin forms a transient covalent bond during catalysis
  • Summary
  • Questions
  • Chapter 5: Coenzymes
  • Enzymes are classified according to their reaction type
  • Adenosine triphosphate has two energy-rich bonds
  • ATP donates phosphate in phosphorylation reactions
  • ATP hydrolysis drives endergonic reactions
  • Cells always try to maintain a high energy charge
  • Dehydrogenase reactions require specialized coenzymes
  • Coenzyme a activates organic acids
  • S-adenosyl methionine donates methyl groups
  • Many enzymes require a metal ion
  • Summary
  • Questions
  • Part Two: Genetic Information: DNA, RNA, and Protein Synthesis
  • Chapter 6: DNA, RNA, and Protein Synthesis
  • All living organisms use DNA as their genetic databank
  • DNA contains four bases
  • DNA forms a double helix
  • DNA can be denatured
  • DNA is supercoiled
  • DNA replication is semiconservative
  • DNA is synthesized by DNA polymerases
  • DNA polymerases have exonuclease activities
  • Unwinding proteins present a single-stranded template to the DNA polymerases
  • One of the new DNA strands is synthesized discontinuously
  • RNA plays key roles in gene expression
  • The σ subunit recognizes promoters
  • DNA is faithfully copied into RNA
  • Some RNAs are chemically modified after transcription
  • The genetic code defines the structural relationship between mRNA and polypeptide
  • Transfer RNA is the adapter molecule in protein synthesis
  • Amino acids are activated by an ester bond with the 3′ terminus of the tRNA
  • Many transfer RNAs recognize more than one codon
  • Ribosomes are the workbenches for protein synthesis
  • The initiation complex brings together ribosome, messenger RNA, and initiator tRNA
  • Polypeptides grow stepwise from the amino terminus to the carboxyl terminus
  • Protein synthesis is energetically expensive
  • Gene expression is tightly regulated
  • A repressor protein regulates transcription of the lac operon in E. coli
  • Anabolic operons are repressed by the end product of the pathway
  • Glucose regulates the transcription of many catabolic operons
  • Transcriptional regulation depends on DNA-binding proteins
  • Summary
  • Questions
  • Chapter 7: The Human Genome
  • Chromatin consists of DNA and histones
  • The nucleosome is the structural unit of chromatin
  • Covalent histone modifications regulate DNA replication and transcription
  • DNA methylation silences genes
  • All eukaryotic chromosomes have a centromere, telomeres, and replication origins
  • Telomerase is required (but not sufficient) for immortality
  • Eukaryotic DNA replication requires three DNA polymerases
  • Most human DNA does not code for proteins
  • Gene families originate by gene duplication
  • The genome contains many tandem repeats
  • Some DNA sequences are copies of functional RNAs
  • Many repetitive DNA sequences are (or were) mobile
  • L1 elements encode a reverse transcriptase
  • ALU sequences spread with the help of L1 reverse transcriptase
  • Mobile elements are dangerous
  • Humans have approximately 20,000 genes
  • Transcriptional initiation requires general transcription factors
  • Genes are surrounded by regulatory sites
  • Gene expression is regulated by DNA-binding proteins
  • Long noncoding RNAs play roles in gene expression
  • mRNA processing starts during transcription
  • Translational initiation requires many initiation factors
  • mRNA processing and translation are often regulated
  • Small RNA molecules inhibit gene expression
  • Mitochondria have their own DNA
  • Human genomes are very diverse
  • Human genomes have many low-frequency copy number variations
  • Summary
  • Questions
  • Chapter 8: Protein Targeting and Proteostasis
  • A signal sequence directs polypeptides to the endoplasmic reticulum
  • Glycoproteins are processed in the secretory pathway
  • The endocytic pathway brings proteins into the cell
  • Lysosomes are organelles of intracellular digestion
  • Autophagy recycles cellular proteins and organelles
  • Poorly folded proteins are either repaired or destroyed
  • Ubiquitin marks proteins for destruction
  • The proteostatic system protects cells from abnormal proteins
  • Summary
  • Questions
  • Chapter 9: Introduction to Genetic Diseases
  • Four types of genetic disease
  • Mutations occur in the germline and in somatic cells
  • Mutations are an important cause of poor health
  • Small mutations lead to abnormal proteins
  • Most mutations are caused by replication errors
  • Mutations can be induced by radiation and chemicals
  • Mismatch repair corrects replication errors
  • Missing bases and abnormal bases need to be replaced
  • Nucleotide excision repair removes bulky lesions
  • Repair of dna double-strand breaks is difficult
  • Hemoglobin genes form two gene clusters
  • Many point mutations in hemoglobin genes are known
  • Sickle cell disease is caused by a point mutation in the β-chain gene
  • SA heterozygotes are protected from tropical malaria
  • α-thalassemia is most often caused by large deletions
  • Many different mutations can cause β-thalassemia
  • Fetal hemoglobin protects from the effects of β-thalassemia and sickle cell disease
  • Polygenic diseases have multiple genetic risk factors
  • Genetic risk factors are discovered in genome-wide association studies
  • Summary
  • Questions
  • Chapter 10: Viruses
  • Viruses can replicate only in a host cell
  • Bacteriophage T4 destroys its host cell
  • DNA viruses substitute their own DNA for the host cell DNA
  • λ phage can integrate its DNA into the host cell chromosome
  • RNA viruses require an RNA-dependent RNA polymerase
  • Retroviruses replicate through a DNA intermediate
  • Plasmids are small “accessory chromosomes” or “symbiotic viruses” of bacteria
  • Bacteria can exchange genes by transformation and transduction
  • Jumping genes can change their position in the genome
  • Summary
  • Questions
  • Chapter 11: DNA Technology
  • Restriction endonucleases cut large DNA molecules into smaller fragments
  • Large probes are used to detect copy number variations
  • Small probes are used to detect point mutations
  • Southern blotting determines the size of restriction fragments
  • DNA can be amplified with the polymerase chain reaction
  • PCR is used for preimplantation genetic diagnosis
  • Allelic heterogeneity is the greatest challenge for molecular genetic diagnosis
  • Normal polymorphisms are used as genetic markers
  • Tandem repeats are used for DNA fingerprinting
  • DNA microarrays can be used for genetic screening
  • DNA microarrays are used for the study of gene expression
  • DNA is sequenced by controlled chain termination
  • Massively parallel sequencing permits cost-efficient whole-genome genetic diagnosis
  • Gene therapy targets somatic cells
  • Viruses are used as vectors for gene therapy
  • Retroviruses can splice a transgene into the cell’s genome
  • Genome editing is based on the making and healing of DNA double strand breaks
  • Designer nucleases are used for genome editing
  • Antisense oligonucleotides can block the expression of rogue genes
  • Genes can be altered in animals
  • Tissue-specific gene expression can be engineered into animals
  • Human germline genome editing is technically possible
  • Summary
  • Questions
  • Part Three: Cell and Tissue Structure
  • Chapter 12: Biological Membranes
  • Membranes consist of lipid and protein
  • Phosphoglycerides are the most abundant membrane lipids
  • Most sphingolipids are glycolipids
  • Cholesterol is the most hydrophobic membrane lipid
  • Membrane lipids form a bilayer
  • The lipid bilayer is a two-dimensional fluid
  • The lipid bilayer is a diffusion barrier
  • Membranes contain integral and peripheral membrane proteins
  • Membranes are asymmetrical
  • Membranes are fragile
  • Membrane proteins carry solutes across the lipid bilayer
  • Transport against an electrochemical gradient requires metabolic energy
  • Active transport consumes ATP
  • Sodium cotransport brings molecules into the cell
  • Summary
  • Questions
  • Chapter 13: The Cytoskeleton
  • The erythrocyte membrane is reinforced by a spectrin network
  • Keratins give strength to epithelia
  • Actin filaments are formed from globular subunits
  • Striated muscle contains thick and thin filaments
  • Myosin is a two-headed molecule with ATPase activity
  • Muscle contraction requires calcium and ATP
  • The cytoskeleton of skeletal muscle is linked to the extracellular matrix
  • Microtubules consist of tubulin
  • Eukaryotic cilia and flagella contain a 9 + 2 array of microtubules
  • Cells form specialized junctions with other cells and with the extracellular matrix
  • Summary
  • Questions
  • Chapter 14: The Extracellular Matrix
  • Collagen is the most abundant protein in the human body
  • The tropocollagen molecule forms a long triple helix
  • Collagen fibrils are staggered arrays of tropocollagen molecules
  • Collagen is subject to extensive posttranslational processing
  • Collagen metabolism is altered in aging and disease
  • Many genetic defects of collagen structure and biosynthesis are known
  • Elastic fibers contain elastin and fibrillin
  • The amorphous ground substance contains hyaluronic acid
  • Sulfated glycosaminoglycans are covalently bound to core proteins
  • Cartilage contains large proteoglycan aggregates
  • Proteoglycans are synthesized in the er and degraded in lysosomes
  • Mucopolysaccharidoses are caused by deficiency of glycosaminoglycan-degrading enzymes
  • Bone consists of calcium phosphates in a collagenous matrix
  • Basement membranes contain type iv collagen, laminin, and heparan sulfate proteoglycans
  • Fibronectin glues cells and collagen fibers together
  • Summary
  • Questions
  • Part Four: Molecular Physiology
  • Chapter 15: Extracellular Messengers
  • Steroid hormones are made from cholesterol
  • Progestins are the biosynthetic precursors of all other steroid hormones
  • Thyroid hormones are synthesized from protein-bound tyrosine
  • T4 becomes activated to T3 in the target tissues
  • Both hypothyroidism and hyperthyroidism are common disorders
  • Insulin is released together with the C-peptide
  • Proopiomelanocortin forms several active products
  • Angiotensin is formed from circulating angiotensinogen
  • Immunoassays are used for determination of hormone levels
  • Catecholamines are synthesized from tyrosine
  • Indoleamines are synthesized from tryptophan
  • Histamine is produced by mast cells and basophils
  • Neurotransmitters are released at synapses
  • Acetylcholine is the neurotransmitter of the neuromuscular junction
  • There are many neurotransmitters
  • Summary
  • Questions
  • Chapter 16: Intracellular Messengers
  • Receptor-hormone interactions are noncovalent, reversible, and saturable
  • Many neurotransmitter receptors are ion channels
  • Steroid and thyroid hormones bind to transcription factors
  • Seven-transmembrane receptors are coupled to G proteins
  • Adenylate cyclase is regulated by G proteins
  • Hormones can both activate and inhibit the camp cascade
  • Cytoplasmic calcium is an important intracellular signal
  • Phospholipase C generates two second messengers
  • Both camp and calcium regulate gene transcription
  • Muscle contraction and exocytosis are triggered by calcium
  • Atrial natriuretic factor acts through a membrane-bound guanylate cyclase
  • Nitric oxide stimulates a soluble guanylate cyclase
  • cGMP is a second messenger in retinal rod cells
  • Receptors for insulin and growth factors are tyrosine-specific protein kinases
  • Growth factors and insulin trigger multiple signaling cascades
  • Cytokine receptors use the JAK-STAT pathway
  • Many receptors become desensitized after overstimulation
  • Summary
  • Questions
  • Chapter 17: Plasma Proteins
  • Plasma proteins are both synthesized and destroyed in the liver
  • Albumin prevents edema
  • Albumin binds many small molecules
  • Some plasma proteins are specialized carriers of small molecules
  • Deficiency of α1-antitrypsin causes lung emphysema
  • Levels of plasma proteins are affected by many diseases
  • Blood components are used for transfusions
  • Blood clotting must be tightly controlled
  • Platelets adhere to exposed subendothelial tissue
  • Insoluble fibrin is formed from soluble fibrinogen
  • Thrombin is derived from prothrombin
  • Factor X can be activated by the extrinsic and intrinsic pathways
  • Negative controls are necessary to prevent thrombosis
  • Plasmin degrades the fibrin clot
  • Heparin and vitamin K antagonists are used as anticoagulants
  • Clotting factor deficiencies cause abnormal bleeding
  • Tissue damage causes release of cellular enzymes into blood
  • Summary
  • Questions
  • Chapter 18: Defense Mechanisms
  • Lipophilic xenobiotics are metabolized to water-soluble products
  • Cytochrome P-450 is involved in phase I metabolism
  • Phase II metabolism makes xenobiotics water-soluble for excretion
  • Phase III metabolism excretes xenobiotic metabolites
  • Drug-metabolizing enzymes are inducible
  • The innate immune system uses pattern recognition receptors
  • Infection triggers inflammation
  • Lymphocytes possess antigen receptors
  • B Lymphocytes produce immunoglobulins
  • Antibodies consist of two light chains and two heavy chains
  • Different immunoglobulin classes have different properties
  • Adaptive immune responses are based on clonal selection
  • Immunoglobulin genes are rearranged during B-cell development
  • The T-cell receptor recruits cytosolic tyrosine protein kinases
  • Mediators of inflammation are produced from arachidonic acid
  • Prostaglandins are synthesized in all tissues
  • Prostanoids participate in many physiological processes
  • Leukotrienes are produced by the lipoxygenase pathway
  • Antiinflammatory drugs inhibit the synthesis of eicosanoids
  • Summary
  • Questions
  • Chapter 19: Cellular Growth Control and Cancer
  • The cell cycle is controlled at checkpoints
  • Cells can be grown in culture
  • Cyclins play key roles in cell cycle control
  • Retinoblastoma protein guards the G1 checkpoint
  • Cell proliferation is triggered by mitogens
  • Mitogens regulate gene expression
  • Cells can commit suicide
  • Cancers are monoclonal in origin
  • Cancer is caused by activation of growth-promoting genes and inactivation of growth-inhibiting genes
  • Some retroviruses contain an oncogene
  • Retroviruses can cause cancer by inserting themselves next to a cellular proto-oncogene
  • Many oncogenes code for components of mitogenic signaling cascades
  • Cancer susceptibility syndromes are caused by inherited mutations in tumor suppressor genes
  • Many tumor suppressor genes are known
  • Components of the cell cycle machinery are abnormal in most cancers
  • DNA Damage causes either growth arrest or apoptosis
  • Most spontaneous cancers are defective in p53 action
  • The PI3K/protein kinase B pathway is activated in many cancers
  • The products of some viral oncogenes neutralize the products of cellular tumor suppressor genes
  • Tumors become more malignant through darwinian selection
  • Intestinal polyps are benign lesions
  • Intestinal polyps can evolve into colon cancer
  • Summary
  • Questions
  • Part Five: Metabolism
  • Chapter 20: Digestive Enzymes
  • Saliva contains α-amylase and lysozyme
  • Protein and fat digestion start in the stomach
  • The pancreas is a factory for digestive enzymes
  • Fat digestion requires bile salts
  • Some digestive enzymes are anchored to the surface of the microvilli
  • Poorly digestible nutrients cause flatulence
  • Many digestive enzymes are released as inactive precursors
  • Summary
  • Questions
  • Chapter 21: Introduction to Metabolic Pathways
  • Alternative substrates can be oxidized in the body
  • Metabolic processes are compartmentalized
  • Free energy changes in metabolic pathways are additive
  • Most metabolic pathways are regulated
  • Feedback inhibition and feedforward stimulation are the most important regulatory principles
  • Metabolism is regulated to ensure homeostasis
  • Inherited enzyme deficiencies cause metabolic diseases
  • Vitamin deficiencies, toxins, and endocrine disorders can disrupt metabolic pathways
  • Summary
  • Questions
  • Chapter 22: Glycolysis, Tricarboxylic Acid Cycle, and Oxidative Phosphorylation
  • Glucose uptake into the cells is regulated
  • Glucose degradation begins in the cytoplasm and ends in the mitochondria
  • Glycolysis begins with ATP-dependent phosphorylations
  • Most glycolytic intermediates have three carbons
  • Phosphofructokinase is the most important regulated enzyme of glycolysis
  • Lactate is produced under anaerobic conditions
  • Pyruvate is decarboxylated to acetyl-CoA in the mitochondria
  • The TCA cycle produces two molecules of carbon dioxide for each acetyl residue
  • Reduced coenzymes are the most important products of the TCA cycle
  • Oxidative pathways are regulated by energy charge and [NADH]/[NAD+] ratio
  • The TCA cycle provides a pool of metabolic intermediates
  • Antiporters transport metabolites across the inner mitochondrial membrane
  • The respiratory chain channels electrons from NADH and FADH2 to molecular oxygen
  • The standard reduction potential is the tendency to donate electrons
  • The respiratory chain contains flavoproteins, iron-sulfur proteins, cytochromes, ubiquinone, and protein-bound copper
  • The respiratory chain contains large multiprotein complexes
  • The respiratory chain creates a proton gradient
  • The proton gradient drives ATP synthesis
  • The efficiency of glucose oxidation is close to 40%
  • Oxidative phosphorylation is limited by the supply of ADP
  • Brown adipose tissue contains an uncoupling protein
  • Mutations in mitochondrial DNA can cause disease
  • Summary
  • Questions
  • Chapter 23: Oxygen Deficiency and Oxygen Toxicity
  • Ischemia leads to infarction
  • Oxidative phosphorylation is inhibited by many poisons
  • Hypoxia inducible factor adjusts cell metabolism to hypoxia
  • Reactive oxygen derivatives are formed during oxidative metabolism
  • The respiratory chain is a major source of superoxide
  • Cells have specialized enzymes to destroy reactive oxygen species
  • Free radical formation is affected by energy supply and energy consumption
  • Some vitamins and phytochemicals can scavEnge free radicals
  • The NRF2 transcription factor coordinates defenses against reactive oxygen species
  • Phagocytic cells use reactive oxygen species for intracellular killing
  • Summary
  • Questions
  • Chapter 24: Carbohydrate Metabolism
  • An adequate blood glucose level must be maintained at all times
  • Gluconeogenesis bypasses the three irreversible reactions of glycolysis
  • Fatty acids cannot be converted into glucose
  • Glycolysis and gluconeogenesis are regulated by hormones
  • Glycolysis and gluconeogenesis are fine tuned by allosteric effectors and hormone-induced enzyme phosphorylations
  • Fructose-2,6-bisphosphate switches the liver from gluconeogenesis to glycolysis
  • Glucokinase is regulated by two regulatory proteins
  • Carbohydrate is stored as glycogen
  • Glycogen is synthesized from glucose
  • Glycogen is degraded by phosphorolytic cleavage
  • Glycogen metabolissm is regulated by hormones and metabolites
  • Glycogen accumulates in several enzyme deficiencies
  • Fructose is channeled into glycolysis/gluconeogenesis
  • Excess fructose is problematic
  • Excess galactose is channeled into the pathways of glucose metabolism
  • The pentose phosphate pathway supplies NADPH and ribose-5-phosphate
  • Fructose is the principal sugar in seminal fluid
  • Amino sugars and sugar acids are made from glucose
  • Summary
  • Questions
  • Chapter 25: The Metabolism of Fatty Acids and Triglycerides
  • Fatty acids differ in chain length and number of double bonds
  • Chylomicrons transport triglycerides from the intestine to other tissues
  • Adipose tissue is specialized for the storage of triglycerides
  • Fat metabolism in adipose tissue is under hormonal control
  • Fatty acids are transported into the mitochondrion
  • β-Oxidation produces acetyl-CoA, NADH, and FADH2
  • Special fatty acids require special reactions
  • The liver converts excess fatty acids to ketone bodies
  • Fatty acids are synthesized from acetyl-CoA
  • Acetyl-CoA is shuttled into the cytoplasm as citrate
  • Fatty acid synthesis is regulated by hormones and metabolites
  • AMP-Activated protein kinase adapts metabolic pathways to cellular energy status
  • Most fatty acids can be synthesized from palmitate
  • Fatty acids regulate gene expression
  • Polyunsaturated fatty acids can be oxidized nonenzymatically
  • Summary
  • Questions
  • Chapter 26: The Metabolism of Membrane Lipids
  • Phosphatidic acid is an intermediate in phosphoglyceride synthesis
  • Phosphoglycerides are remodeled continuously
  • Sphingolipids are synthesized from ceramide
  • Deficiencies of sphingolipid-degrading enzymes cause lipid storage diseases
  • Cholesterol is the least soluble membrane lipid
  • Cholesterol is derived from both endogenous synthesis and the diet
  • Cholesterol biosynthesis is regulated at the level of HMG-CoA reductase
  • Bile acids are synthesized from cholesterol
  • Bile acids are subject to extensive enterohepatic circulation
  • Most gallstones consist of cholesterol
  • Summary
  • Questions
  • Chapter 27: Lipid Transport
  • Most plasma lipids are components of lipoproteins
  • Lipoproteins have characteristic lipid and protein compositions
  • Dietary lipids are transported by chylomicrons
  • VLDL is a precursor of LDL
  • LDL is removed by receptor-mediated endocytosis
  • Cholesterol regulates its own metabolism
  • HDL is needed for reverse cholesterol transport
  • Lipoproteins can initiate atherosclerosis
  • Lipoproteins respond to diet and lifestyle
  • Hyperlipoproteinemias are grouped into five phenotypes
  • Hyperlipidemias are treated with diet and drugs
  • Summary
  • Questions
  • Chapter 28: Amino Acid Metabolism
  • Amino acids can be used for gluconeogenesis and ketogenesis
  • The nitrogen balance indicates the net rate of protein synthesis
  • The amino group of amino acids is released as ammonia
  • Ammonia is detoxified to urea
  • Urea is synthesized in the urea cycle
  • Hyperammonemia can be treated with diet and drugs
  • Some amino acids are closely related to common metabolic intermediates
  • Glycine, serine, and threonine are glucogenic
  • Proline, arginine, ornithine, and histidine are degraded to glutamate
  • Methionine and cysteine are metabolically related
  • Valine, leucine, and isoleucine are degraded by transamination and oxidative decarboxylation
  • Phenylalanine and tyrosine are both glucogenic and ketogenic
  • Melanin is synthesized from tyrosine
  • Lysine and tryptophan have lengthy catabolic pathways
  • The liver is the most important organ of amino acid metabolism
  • Glutamine participates in renal acid-base regulation
  • Summary
  • Questions
  • Chapter 29: Metabolism of Iron and Heme
  • Iron is conserved very efficiently in the body
  • Iron uptake by cells is regulated
  • Dietary iron is absorbed in the duodenum
  • Iron deficiency is the most common micronutrient deficiency worldwide
  • Bone marrow and liver are the most important sites of heme synthesis
  • Heme is synthesized from succinyl-CoA and glycine
  • Porphyrias are caused by deficiencies of heme-synthesizing enzymes
  • Heme is degraded to bilirubin
  • Bilirubin is conjugated and excreted by the liver
  • Elevations of serum bilirubin cause jaundice
  • Many diseases can cause jaundice
  • Summary
  • Questions
  • Chapter 30: The Metabolism of Purines and Pyrimidines
  • Purine synthesis starts with ribose-5-phosphate
  • Purines are degraded to uric acid
  • Free purine bases can be salvaged
  • Pyrimidines are synthesized from carbamoyl phosphate and aspartate
  • DNA synthesis requires deoxyribonucleotides
  • Many antineoplastic drugs inhibit nucleotide metabolism
  • Uric acid has limited water solubility
  • Hyperuricemia causes gout
  • Abnormalities of purine-metabolizing enzymes can cause gout
  • Gout can be treated with drugs
  • Summary
  • Questions
  • Chapter 31: Micronutrients
  • Riboflavin is a precursor of flavin mononucleotide and flavin adenine dinucleotide
  • Niacin is a precursor of NAD and NADP
  • Thiamine deficiency causes weakness and amnesia
  • Vitamin B6 plays a key role in amino acid metabolism
  • Pantothenic acid is a building block of coenzyme A
  • Biotin is a coenzyme in carboxylation reactions
  • Folic acid deficiency causes megaloblastic anemia
  • Vitamin B12 requires intrinsic factor for its absorption
  • Vitamin C is a water-soluble antioxidant
  • Retinol, retinal, and retinoic acid are the active forms of vitamin A
  • Vitamin D is a prohormone
  • Vitamin E prevents lipid oxidation
  • Many vitamins and phytochemicals are antioxidants
  • Vitamin K is required for blood clotting
  • Zinc is a constituent of many enzymes
  • Copper participates in reactions of molecular oxygen
  • Some trace elements serve very specific functions
  • Summary
  • Questions
  • Chapter 32: Integration of Metabolism
  • Insulin is released in response to elevated glucose
  • Insulin stimulates the utilization of nutrients
  • Protein synthesis is coordinated by the mTOR complex
  • Glucagon maintains the blood glucose level
  • Catecholamines mediate the flight-or-fight response
  • Glucocorticoids are released in chronic stress
  • Energy is expended continuously
  • Stored fat and glycogen are degraded between meals
  • Adipose tissue is the most important energy depot
  • The liver converts dietary carbohydrates to glycogen and fat after a meal
  • The liver maintains the blood glucose level during fasting
  • Ketone bodies provide lipid-based energy during fasting
  • Obesity is common in all affluent countries
  • Appetite control is the most important determinant of obesity
  • Obesity is related to insulin resistance
  • Diabetes is caused by insulin deficiency or insulin resistance
  • In diabetes, metabolism is regulated as in starvation
  • Diabetes is diagnosed with laboratory tests
  • Diabetes leads to late complications
  • Many drugs are available for diabetes treatment
  • Contracting muscle has three energy sources
  • Physical exercise leads to adaptive changes
  • Ethanol is metabolized to acetyl-CoA in the liver
  • Liver metabolism is deranged by alcohol
  • Alcohol abuse leads to fatty liver and liver cirrhosis
  • Most “diseases of civilization” are caused by aberrant lifestyles
  • Aging is the greatest challenge for medical research
  • Antiaging treatments are being investigated
  • Summary
  • Questions
  • Answers to Questions
  • Chapter 1
  • Chapter 2
  • Chapter 3
  • Chapter 4
  • Chapter 5
  • Chapter 6
  • Chapter 7
  • Chapter 8
  • Chapter 9
  • Chapter 10
  • Chapter 11
  • Chapter 12
  • Chapter 13
  • Chapter 14
  • Chapter 15
  • Chapter 16
  • Chapter 17
  • Chapter 18
  • Chapter 19
  • Chapter 20
  • Chapter 21
  • Chapter 22
  • Chapter 23
  • Chapter 24
  • Chapter 25
  • Chapter 26
  • Chapter 27
  • Chapter 28
  • Chapter 29
  • Chapter 30
  • Chapter 31
  • Chapter 32
  • Glossary
  • Credits
  • Index

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